• PMOD Rodent Brain Tool (PNROD)
• PNROD Organization and User Interface
  • PNROD Sub-Pages
  • PNROD Taskbar
    • Loading Images from Taskbar
    • Saving Intermediate Results
    • Run All Processing Steps
    • 3D Rendering of Brain VOIs
  • PNROD Bottom Line
    • Configuration
    • Protocols
  • Fusion Image Display
• PNROD Data Processing
  • Brain Atlas Adjustment Page
    • Atlas Selection
    • Atlas VOI Interface
  • Workflow for dual-Modality Studies
    • Processing Overview
    • Input Image Loading, Time Averaging, Cropping
    • Anatomical Image Loading, Cropping
    • Rigid Matching Input to Anatomical
    • Normalization of the Anatomical Image
    • Brain Segments Calculation
    • Brain VOI Editing, Statistics Calculation
  • Workflow for single-Modality Studies
    • Processing Overview
    • Input Image Loading, Time Averaging, Cropping
    • Normalization of the Input Image
    • Brain Segments Calculation
    • Brain VOI Editing, Statistics Calculation
  • Result Statistics Page
    • Statistics of Dynamic PET Data
    • Statistics of Static Data
  • Parametric Mapping
• PNROD Reference
  • Atlas Methodology
    • VOI Atlas Organization in PMOD
      • Atlas Image
      • Label List File
      • Atlas Manifest File
      • Spatial Normalization Methods
      • Template Files for Spatial Normalization
      • Normalization Mask
      • Atlas Creation from VOIs
    • Rodent VOI Atlases in PNROD 
      • Sprague-Dawley Rat Brain Atlas (A.Schwarz) & PET/SPECT Templates (Groningen)
      • Sprague-Dawley Rat Brain Atlas (Schiffer)
      • Wistar Rat Brain Atlas (Tohoku)
      • Sprague-Dawley Rat Brain (Waxholm-80um)
      • Mouse Brain Atlas (Ma-Benveniste-Mirrione)
      • Mouse Brain (Waxholm-40um)
  • Partial-Volume Correction (PVC)
    • VOI Based Partial-Volume Correction (GTM Method)
    • LMA Variant of GTM Method
  • System Requirements
  • References
• PMOD Disclaimer
• PMOD Copyright Notice