• PMOD Geometric Models and Simulation Tool (PGEM)
  • User Interface
  • Configuration Settings
  • OpenFoam CFD Server
  • Additional Documentation
• DTI Tractography
  • Workflow Organization
  • Loading the Diffusion Tensor Images
  • Defining VOIs for Seeding and Imposing Restrictions
  • Calculating the Fiber Tracks
  • Visualizing the Fiber Tracks in 3D
  • DTI Report
  • Evaluating Diffusion Images along Tracks
  • Saving the Tracks
  • Protocol File
• 4D Flow
  • Workflow Organization
  • Loading the 4D Flow Images
  • Entering the Maximal Flow Value
  • Defining VOIs for Seeding and Imposing Restrictions
  • Calculating the Streamlines/Pathlines
  • Visualizing the Streamlines/Pathlines in 3D
  • 4D Flow Report
  • Creating VOIs along the Streamlines/Pathlines
  • Saving the Streamlines/Pathlines
  • Protocol File
• Generation of Dynamic PET Phantom Images
  • External Preparations
    • Phantom VOIs
    • Phantom Dynamic TACs
  • Dynamic PET Image Creation
    • Anatomical Model Definition
    • VOI Addition
    • Anatomical Model
    • Phantom Creation
• Geometric Model Construction and CFD Simulation
  • Geometric Model Construction
    • Workflow Organization
    • Start of the Model Definition
    • Time Definition
    • Image Definition
    • VOI Definition
    • VOI Addition
    • Anatomical Model
      • Tree Organization of the Anatomical Model
      • Components of the Model Folder in PMOD
      • Definition of the Characteristics for the Model's Elements
      • Definition of the Properties for the Model's Elements
      • Interactive Exploration of the Model
  • CFD Simulation and Implementation in PGEM
    • Create CFD Case from the Geometric Model
      • Geometry Selection in the Model
      • Surface Mesh Creation
        • Cutting Planes Definition with 3D
      • Volume Mesh Creation
      • Boundary Condition Settings
      • Solution Control
    • Create CFD Case from a Surface Mesh
    • Create CFD Case from a Volume Mesh
    • Create CFD case from an Existing Case
    • Management of the OpenFoam Remote Cases
    • Management of the OpenFoam Local Cases
      • Conversion of CFD Resuts to Images
      • Visualization of the CFD Results
        • As Polymesh
        • As Volume Rendering
• References
• PMOD Disclaimer
• PMOD Copyright Notice